Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AL360270.3-201ENST00000609118 1348 ntBASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AC087499.6-201ENST00000411576 835 ntBASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 PIN1P1-201ENST00000412108 996 ntBASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AC099568.2-201ENST00000609194 695 ntBASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 AL158212.4-201ENST00000624062 1286 ntBASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIN7CQ9NUP9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 AC005840.4-201ENST00000541242 2494 ntBASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIN7CQ9NUP9 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 MIR661-201ENST00000384842 89 ntBASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AL353779.1-201ENST00000434793 351 ntBASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AL132655.2-201ENST00000596276 594 ntBASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms