Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AC023824.1-201ENST00000562945 2975 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 MIR557-201ENST00000385239 98 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AC092580.1-201ENST00000433998 658 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 CTBP2P6-201ENST00000526402 1229 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AL590235.1-201ENST00000564650 861 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 PHBP15-201ENST00000574228 665 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 AC022726.2-201ENST00000634673 547 ntBASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNTNAP3Q9BZ76 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 ORAOV1P1-201ENST00000503108 395 ntBASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AC106047.2-201ENST00000511723 743 ntBASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AL450472.2-201ENST00000603663 1156 ntBASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms