Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 AC018665.1-201ENST00000622927 1362 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
VRK1Q99986 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 BEND3P1-201ENST00000421591 1944 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
VRK1Q99986 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 AC140479.7-201ENST00000636301 2332 ntBASIC13.28□□□□□ -0.28
VRK1Q99986 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.28□□□□□ -0.28
VRK1Q99986 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 AC079776.1-201ENST00000401540 1152 ntBASIC13.28□□□□□ -0.28
VRK1Q99986 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.28□□□□□ -0.28
VRK1Q99986 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.28□□□□□ -0.28
VRK1Q99986 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.28□□□□□ -0.28
VRK1Q99986 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VRK1Q99986 SLC25A47P1-201ENST00000531577 414 ntBASIC13.28□□□□□ -0.28
VRK1Q99986 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.28□□□□□ -0.28
VRK1Q99986 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 AC233724.13-201ENST00000598383 410 ntBASIC13.28□□□□□ -0.28
VRK1Q99986 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
VRK1Q99986 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.28□□□□□ -0.28
VRK1Q99986 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VRK1Q99986 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
VRK1Q99986 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VRK1Q99986 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
VRK1Q99986 AC092127.1-201ENST00000567093 3455 ntBASIC13.27□□□□□ -0.28
VRK1Q99986 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.27□□□□□ -0.28
VRK1Q99986 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.27□□□□□ -0.28
VRK1Q99986 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VRK1Q99986 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VRK1Q99986 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.27□□□□□ -0.28
VRK1Q99986 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
VRK1Q99986 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
VRK1Q99986 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VRK1Q99986 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.27□□□□□ -0.28
VRK1Q99986 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VRK1Q99986 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VRK1Q99986 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 ACTG1P3-201ENST00000431775 1114 ntBASIC13.27□□□□□ -0.29
VRK1Q99986 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 AL355864.2-201ENST00000447420 863 ntBASIC13.27□□□□□ -0.29
VRK1Q99986 CROCCP4-201ENST00000457096 498 ntBASIC13.27□□□□□ -0.29
VRK1Q99986 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms