Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 AC015818.8-201ENST00000587907 1519 ntBASIC16.23■□□□□ 0.19
CNGA4Q8IV77 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.23■□□□□ 0.19
CNGA4Q8IV77 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC138969.2-201ENST00000532739 9932 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 CICP16-201ENST00000502609 2813 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 BX842568.4-201ENST00000421222 227 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AP006288.1-201ENST00000446065 395 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 FAM86LP-201ENST00000478302 853 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC109322.1-201ENST00000524499 1264 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC140878.1-201ENST00000565277 250 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AL049840.4-201ENST00000602422 811 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 AC093813.1-201ENST00000605066 256 ntBASIC16.22■□□□□ 0.19
CNGA4Q8IV77 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNGA4Q8IV77 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.21■□□□□ 0.19
CNGA4Q8IV77 AL139094.1-201ENST00000405549 1188 ntBASIC16.21■□□□□ 0.19
CNGA4Q8IV77 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 TLE1P1-201ENST00000422965 589 ntBASIC16.21■□□□□ 0.19
CNGA4Q8IV77 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.21■□□□□ 0.19
CNGA4Q8IV77 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 AC215219.1-201ENST00000400706 1817 ntBASIC16.21■□□□□ 0.19
CNGA4Q8IV77 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.21■□□□□ 0.19
CNGA4Q8IV77 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.21■□□□□ 0.18
CNGA4Q8IV77 SALL4P5-201ENST00000419001 1760 ntBASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms