Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC009407.1-201ENST00000568958 598 ntBASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC107373.2-201ENST00000607735 490 ntBASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AL691403.2-201ENST00000618460 490 ntBASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC092135.3-201ENST00000624151 1846 ntBASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 AL589987.1-201ENST00000453380 819 ntBASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FAM86LP-201ENST00000478302 853 ntBASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 AC135586.1-201ENST00000539323 574 ntBASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 AC152010.1-201ENST00000415779 2006 ntBASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 AL354702.1-201ENST00000442006 1960 ntBASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMARCD3Q6STE5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.66□□□□□ -0.22
SMARCD3Q6STE5 NUS1P3-201ENST00000423502 862 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 506.1 ms