Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 AC010327.5-201ENST00000586923 3061 ntBASIC15.69■□□□□ 0.1
RNF43Q68DV7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 C2orf27AP3-201ENST00000434123 579 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 EIF3FP3-201ENST00000434851 1086 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 AP001258.2-201ENST00000529891 490 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 DUX4L47-201ENST00000566374 394 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 AL354718.3-201ENST00000616414 581 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 CR382287.1-201ENST00000623954 586 ntBASIC15.68■□□□□ 0.1
RNF43Q68DV7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF43Q68DV7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF43Q68DV7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms