Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 KRT8P18-201ENST00000413425 1445 ntBASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 AC244197.1-201ENST00000456494 951 ntBASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 RN7SL596P-201ENST00000582123 288 ntBASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPAQ5VT25 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPAQ5VT25 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 LINC00115-201ENST00000473798 1317 ntBASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 SNORD3B-1-201ENST00000577988 758 ntBASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 AP005264.6-204ENST00000588436 719 ntBASIC21.77■■□□□ 1.08
CDC42BPAQ5VT25 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CDC42BPAQ5VT25 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDC42BPAQ5VT25 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.77■■□□□ 1.07
CDC42BPAQ5VT25 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDC42BPAQ5VT25 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A21P-201ENST00000510875 1396 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A15P-201ENST00000514465 1395 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A6P-201ENST00000515148 1394 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A16P-201ENST00000526662 1395 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A9P-201ENST00000527940 1395 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A5P-201ENST00000528738 1395 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A14P-201ENST00000530386 1395 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FAM90A13P-201ENST00000534703 1395 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 AC215219.1-201ENST00000400706 1817 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 GNG10P1-201ENST00000452289 199 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms