Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPK4P57078 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RIPK4P57078 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPK4P57078 AC006504.5-208ENST00000588784 2401 ntBASIC19.42■□□□□ 0.7
RIPK4P57078 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPK4P57078 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RIPK4P57078 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RIPK4P57078 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RIPK4P57078 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RIPK4P57078 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK4P57078 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.41■□□□□ 0.7
RIPK4P57078 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.41■□□□□ 0.7
RIPK4P57078 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK4P57078 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.41■□□□□ 0.7
RIPK4P57078 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 GPR182-203ENST00000622922 591 ntBASIC19.41■□□□□ 0.7
RIPK4P57078 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK4P57078 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK4P57078 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RIPK4P57078 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK4P57078 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 AC244394.1-201ENST00000435000 1665 ntBASIC19.4■□□□□ 0.7
RIPK4P57078 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RIPK4P57078 AC103988.2-201ENST00000561804 725 ntBASIC19.4■□□□□ 0.7
RIPK4P57078 AC100827.2-201ENST00000563214 1194 ntBASIC19.4■□□□□ 0.7
RIPK4P57078 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 MIR4525-201ENST00000580000 75 ntBASIC19.4■□□□□ 0.7
RIPK4P57078 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.4■□□□□ 0.7
RIPK4P57078 AC007663.3-201ENST00000609632 465 ntBASIC19.4■□□□□ 0.7
RIPK4P57078 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK4P57078 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.4■□□□□ 0.7
RIPK4P57078 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RIPK4P57078 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK4P57078 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK4P57078 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RIPK4P57078 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK4P57078 AC067930.6-201ENST00000623257 4947 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.39■□□□□ 0.69
RIPK4P57078 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 AC006033.1-201ENST00000440505 426 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 RNMTL1P1-201ENST00000454103 560 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms