Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 RNMTL1P1-201ENST00000454103 560 ntBASIC13.3□□□□□ -0.28
GFRA1P56159 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.3□□□□□ -0.28
GFRA1P56159 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 MIR6720-201ENST00000611664 98 ntBASIC13.3□□□□□ -0.28
GFRA1P56159 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GFRA1P56159 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GFRA1P56159 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GFRA1P56159 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
GFRA1P56159 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 DPM3-202ENST00000368399 517 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.29□□□□□ -0.28
GFRA1P56159 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 AC012441.2-201ENST00000444843 739 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 KLF2P1-201ENST00000447438 1042 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.29□□□□□ -0.28
GFRA1P56159 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 AC044849.1-201ENST00000519737 1188 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.29□□□□□ -0.28
GFRA1P56159 AC103810.3-201ENST00000583567 96 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.29□□□□□ -0.28
GFRA1P56159 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.29□□□□□ -0.28
GFRA1P56159 AL451050.2-201ENST00000606967 682 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 AC244452.3-201ENST00000636814 210 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 Z98259.2-201ENST00000641583 609 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
GFRA1P56159 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 AC004899.1-201ENST00000424687 1714 ntBASIC13.29□□□□□ -0.28
GFRA1P56159 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.29□□□□□ -0.28
GFRA1P56159 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GFRA1P56159 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.29□□□□□ -0.28
GFRA1P56159 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.29□□□□□ -0.28
GFRA1P56159 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GFRA1P56159 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GFRA1P56159 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.28□□□□□ -0.28
GFRA1P56159 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
GFRA1P56159 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.28□□□□□ -0.28
GFRA1P56159 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GFRA1P56159 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms