Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.96□□□□□ -0.34
CBX5P45973 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CBX5P45973 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CBX5P45973 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CBX5P45973 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CBX5P45973 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.96□□□□□ -0.34
CBX5P45973 AL928921.2-201ENST00000641325 2442 ntBASIC12.96□□□□□ -0.34
CBX5P45973 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CBX5P45973 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.95□□□□□ -0.34
CBX5P45973 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 FAM58CP-201ENST00000435741 640 ntBASIC12.95□□□□□ -0.34
CBX5P45973 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 AL591424.1-201ENST00000442569 1213 ntBASIC12.95□□□□□ -0.34
CBX5P45973 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.95□□□□□ -0.34
CBX5P45973 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.95□□□□□ -0.34
CBX5P45973 SLC25A39P2-201ENST00000537614 270 ntBASIC12.95□□□□□ -0.34
CBX5P45973 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.95□□□□□ -0.34
CBX5P45973 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.95□□□□□ -0.34
CBX5P45973 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 AC092902.6-201ENST00000641783 218 ntBASIC12.95□□□□□ -0.34
CBX5P45973 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CBX5P45973 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 AC097359.2-201ENST00000604992 2389 ntBASIC12.95□□□□□ -0.34
CBX5P45973 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.95□□□□□ -0.34
CBX5P45973 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CBX5P45973 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.95□□□□□ -0.34
CBX5P45973 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 LILRP1-201ENST00000444199 1370 ntBASIC12.94□□□□□ -0.34
CBX5P45973 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CBX5P45973 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CBX5P45973 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.94□□□□□ -0.34
CBX5P45973 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CBX5P45973 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CBX5P45973 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 AP001267.2-201ENST00000532619 2086 ntBASIC12.94□□□□□ -0.34
CBX5P45973 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CBX5P45973 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CBX5P45973 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms