Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
GDNFP39905 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.06□□□□□ -0.32
GDNFP39905 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.06□□□□□ -0.32
GDNFP39905 CETN4P-206ENST00000642099 2168 ntBASIC13.06□□□□□ -0.32
GDNFP39905 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 AC125807.1-201ENST00000483097 614 ntBASIC13.06□□□□□ -0.32
GDNFP39905 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 AC025678.2-201ENST00000562061 970 ntBASIC13.06□□□□□ -0.32
GDNFP39905 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.06□□□□□ -0.32
GDNFP39905 AC051619.7-201ENST00000568314 623 ntBASIC13.06□□□□□ -0.32
GDNFP39905 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.06□□□□□ -0.32
GDNFP39905 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.06□□□□□ -0.32
GDNFP39905 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.06□□□□□ -0.32
GDNFP39905 AL138828.2-201ENST00000615812 383 ntBASIC13.06□□□□□ -0.32
GDNFP39905 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
GDNFP39905 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.06□□□□□ -0.32
GDNFP39905 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 AL591122.2-201ENST00000624125 1853 ntBASIC13.06□□□□□ -0.32
GDNFP39905 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GDNFP39905 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 AC015909.5-201ENST00000624336 2266 ntBASIC13.05□□□□□ -0.32
GDNFP39905 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
GDNFP39905 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
GDNFP39905 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 KLF2P3-201ENST00000451977 1087 ntBASIC13.05□□□□□ -0.32
GDNFP39905 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 GPALPP1-207ENST00000611650 899 ntBASIC13.05□□□□□ -0.32
GDNFP39905 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.05□□□□□ -0.32
GDNFP39905 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 INE2-201ENST00000630399 1874 ntBASIC13.05□□□□□ -0.32
GDNFP39905 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.05□□□□□ -0.32
GDNFP39905 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
GDNFP39905 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.05□□□□□ -0.32
GDNFP39905 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GDNFP39905 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
GDNFP39905 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
GDNFP39905 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GDNFP39905 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.04□□□□□ -0.32
GDNFP39905 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms