Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.62■□□□□ 0.57
COL15A1P39059 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 AHCYP4-201ENST00000419201 1315 ntBASIC18.62■□□□□ 0.57
COL15A1P39059 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.62■□□□□ 0.57
COL15A1P39059 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.62■□□□□ 0.57
COL15A1P39059 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.62■□□□□ 0.57
COL15A1P39059 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.62■□□□□ 0.57
COL15A1P39059 AL807761.2-201ENST00000422849 729 ntBASIC18.62■□□□□ 0.57
COL15A1P39059 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.62■□□□□ 0.57
COL15A1P39059 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.62■□□□□ 0.57
COL15A1P39059 KRT18P66-201ENST00000452970 1269 ntBASIC18.62■□□□□ 0.57
COL15A1P39059 TMCO5B-205ENST00000530020 894 ntBASIC18.62■□□□□ 0.57
COL15A1P39059 SIGLEC18P-201ENST00000602271 909 ntBASIC18.62■□□□□ 0.57
COL15A1P39059 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.62■□□□□ 0.57
COL15A1P39059 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.62■□□□□ 0.57
COL15A1P39059 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.62■□□□□ 0.57
COL15A1P39059 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.61■□□□□ 0.57
COL15A1P39059 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL15A1P39059 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.61■□□□□ 0.57
COL15A1P39059 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL15A1P39059 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.61■□□□□ 0.57
COL15A1P39059 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 FTH1P22-201ENST00000456305 520 ntBASIC18.61■□□□□ 0.57
COL15A1P39059 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.61■□□□□ 0.57
COL15A1P39059 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.61■□□□□ 0.57
COL15A1P39059 AC007326.1-201ENST00000604539 458 ntBASIC18.61■□□□□ 0.57
COL15A1P39059 AC005618.3-201ENST00000624928 458 ntBASIC18.61■□□□□ 0.57
COL15A1P39059 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL15A1P39059 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.61■□□□□ 0.57
COL15A1P39059 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 LINC00528-201ENST00000600723 2160 ntBASIC18.61■□□□□ 0.57
COL15A1P39059 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL15A1P39059 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
COL15A1P39059 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.6■□□□□ 0.57
COL15A1P39059 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.6■□□□□ 0.57
COL15A1P39059 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.6■□□□□ 0.57
COL15A1P39059 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.6■□□□□ 0.57
COL15A1P39059 AC003686.1-201ENST00000550956 1034 ntBASIC18.6■□□□□ 0.57
COL15A1P39059 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
COL15A1P39059 AL022334.2-201ENST00000610000 484 ntBASIC18.6■□□□□ 0.57
COL15A1P39059 AC084781.1-201ENST00000613737 656 ntBASIC18.6■□□□□ 0.57
COL15A1P39059 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.6■□□□□ 0.57
COL15A1P39059 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.6■□□□□ 0.57
COL15A1P39059 MIR6858-201ENST00000620733 67 ntBASIC18.6■□□□□ 0.57
COL15A1P39059 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL15A1P39059 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.6■□□□□ 0.57
COL15A1P39059 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.6■□□□□ 0.57
COL15A1P39059 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
COL15A1P39059 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL15A1P39059 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.59■□□□□ 0.57
COL15A1P39059 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.59■□□□□ 0.57
COL15A1P39059 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
COL15A1P39059 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms