Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.13■□□□□ 0.49
PDE6BP35913 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 KRT8P1-201ENST00000557533 1207 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 HERC2P11-201ENST00000562845 725 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 AC100756.2-201ENST00000569537 736 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 MIR4472-1-201ENST00000584349 80 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE6BP35913 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.13■□□□□ 0.49
PDE6BP35913 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 MRPL37P1-201ENST00000592451 1337 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 KRT8P28-201ENST00000433288 1390 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6BP35913 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
PDE6BP35913 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDE6BP35913 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE6BP35913 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE6BP35913 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDE6BP35913 AL512306.1-201ENST00000432698 848 ntBASIC18.12■□□□□ 0.49
PDE6BP35913 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE6BP35913 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
PDE6BP35913 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.12■□□□□ 0.49
PDE6BP35913 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDE6BP35913 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE6BP35913 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDE6BP35913 AL590440.2-201ENST00000641973 1595 ntBASIC18.12■□□□□ 0.49
PDE6BP35913 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6BP35913 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6BP35913 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PDE6BP35913 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6BP35913 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDE6BP35913 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE6BP35913 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE6BP35913 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PDE6BP35913 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE6BP35913 LINC00634-202ENST00000505157 222 ntBASIC18.11■□□□□ 0.49
PDE6BP35913 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6BP35913 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6BP35913 AC087481.3-201ENST00000602886 1894 ntBASIC18.11■□□□□ 0.49
PDE6BP35913 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6BP35913 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6BP35913 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.1■□□□□ 0.49
PDE6BP35913 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6BP35913 MROH4P-201ENST00000431302 1578 ntBASIC18.1■□□□□ 0.49
PDE6BP35913 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms