Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CKS2P33552 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS2P33552 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CKS2P33552 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.02□□□□□ -0.64
CKS2P33552 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS2P33552 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CKS2P33552 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 AC104457.1-201ENST00000401024 814 ntBASIC11.02□□□□□ -0.65
CKS2P33552 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 AC004945.1-201ENST00000416738 983 ntBASIC11.02□□□□□ -0.65
CKS2P33552 AC142381.1-201ENST00000426099 345 ntBASIC11.02□□□□□ -0.65
CKS2P33552 AC018712.1-201ENST00000455767 687 ntBASIC11.02□□□□□ -0.65
CKS2P33552 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS2P33552 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 AC112191.1-201ENST00000523689 701 ntBASIC11.02□□□□□ -0.65
CKS2P33552 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS2P33552 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 AC068137.2-201ENST00000605408 478 ntBASIC11.02□□□□□ -0.65
CKS2P33552 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS2P33552 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS2P33552 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CKS2P33552 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS2P33552 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS2P33552 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 AC019294.4-201ENST00000561777 2905 ntBASIC11.01□□□□□ -0.65
CKS2P33552 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.01□□□□□ -0.65
CKS2P33552 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.01□□□□□ -0.65
CKS2P33552 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 AC025181.2-201ENST00000606994 802 ntBASIC11.01□□□□□ -0.65
CKS2P33552 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
CKS2P33552 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 AKAP8P1-201ENST00000434743 1349 ntBASIC11.01□□□□□ -0.65
CKS2P33552 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms