Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CHRNB4P30926 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CHRNB4P30926 SHC1P1-201ENST00000425230 1745 ntBASIC13.24□□□□□ -0.29
CHRNB4P30926 AC024909.3-201ENST00000611513 2257 ntBASIC13.24□□□□□ -0.29
CHRNB4P30926 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.24□□□□□ -0.29
CHRNB4P30926 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.24□□□□□ -0.29
CHRNB4P30926 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CHRNB4P30926 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRNB4P30926 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.23□□□□□ -0.29
CHRNB4P30926 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.23□□□□□ -0.29
CHRNB4P30926 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.23□□□□□ -0.29
CHRNB4P30926 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.23□□□□□ -0.29
CHRNB4P30926 PUDPP3-201ENST00000445368 636 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CHRNB4P30926 AC012618.1-201ENST00000461223 412 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.23□□□□□ -0.29
CHRNB4P30926 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 AC090164.2-201ENST00000611487 516 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CHRNB4P30926 MIR6727-201ENST00000620702 65 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 AC079336.7-201ENST00000623428 1078 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 AC068587.8-201ENST00000641239 219 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 AL157791.1-201ENST00000553667 1699 ntBASIC13.23□□□□□ -0.29
CHRNB4P30926 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.23□□□□□ -0.29
CHRNB4P30926 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.23□□□□□ -0.29
CHRNB4P30926 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHRNB4P30926 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRNB4P30926 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.22□□□□□ -0.29
CHRNB4P30926 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.22□□□□□ -0.29
CHRNB4P30926 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRNB4P30926 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRNB4P30926 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRNB4P30926 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHRNB4P30926 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRNB4P30926 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRNB4P30926 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRNB4P30926 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms