Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNA2P20248 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 CICP11-201ENST00000434745 2827 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCNA2P20248 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNA2P20248 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNA2P20248 AC015922.1-201ENST00000421102 1152 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNA2P20248 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 CYMP-203ENST00000474680 1263 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNA2P20248 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 AC135586.1-201ENST00000539323 574 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CCNA2P20248 AC009407.1-201ENST00000568958 598 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 AC008738.7-201ENST00000609744 511 ntBASIC14.18□□□□□ -0.14
CCNA2P20248 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNA2P20248 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNA2P20248 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNA2P20248 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCNA2P20248 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCNA2P20248 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNA2P20248 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 RPL13P2-201ENST00000440687 659 ntBASIC14.17□□□□□ -0.14
CCNA2P20248 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNA2P20248 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNA2P20248 AC004890.2-204ENST00000481968 304 ntBASIC14.17□□□□□ -0.14
CCNA2P20248 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCNA2P20248 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 DMBT1P1-203ENST00000636837 4628 ntBASIC14.17□□□□□ -0.14
CCNA2P20248 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 AC084364.1-201ENST00000551967 1556 ntBASIC14.17□□□□□ -0.14
CCNA2P20248 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 AC022144.1-201ENST00000602255 1580 ntBASIC14.17□□□□□ -0.14
CCNA2P20248 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCNA2P20248 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNA2P20248 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCNA2P20248 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNA2P20248 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCNA2P20248 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms