Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD53P19397 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 SBF1P1-201ENST00000444527 5631 ntBASIC13.63□□□□□ -0.23
CD53P19397 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AC007787.1-201ENST00000588095 1583 ntBASIC13.63□□□□□ -0.23
CD53P19397 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.63□□□□□ -0.23
CD53P19397 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD53P19397 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD53P19397 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 MIR1908-201ENST00000410394 80 ntBASIC13.63□□□□□ -0.23
CD53P19397 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.63□□□□□ -0.23
CD53P19397 AL162726.2-201ENST00000438986 1017 ntBASIC13.63□□□□□ -0.23
CD53P19397 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.63□□□□□ -0.23
CD53P19397 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.63□□□□□ -0.23
CD53P19397 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.63□□□□□ -0.23
CD53P19397 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.63□□□□□ -0.23
CD53P19397 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.63□□□□□ -0.23
CD53P19397 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.63□□□□□ -0.23
CD53P19397 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.63□□□□□ -0.23
CD53P19397 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AC018529.2-202ENST00000611482 3087 ntBASIC13.63□□□□□ -0.23
CD53P19397 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CD53P19397 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.63□□□□□ -0.23
CD53P19397 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD53P19397 KRT8P22-201ENST00000562317 1415 ntBASIC13.63□□□□□ -0.23
CD53P19397 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 AC093525.8-201ENST00000624099 1342 ntBASIC13.63□□□□□ -0.23
CD53P19397 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD53P19397 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.62□□□□□ -0.23
CD53P19397 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD53P19397 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms