Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 AC015802.1-201ENST00000588104 1449 ntBASIC15.09■□□□□ 0.01
HLA-DQB2P05538 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 AC002472.3-201ENST00000640124 621 ntBASIC15.09■□□□□ 0.01
HLA-DQB2P05538 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 AHCYP2-201ENST00000430630 1300 ntBASIC15.09■□□□□ 0.01
HLA-DQB2P05538 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DQB2P05538 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQB2P05538 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQB2P05538 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQB2P05538 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQB2P05538 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
HLA-DQB2P05538 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
HLA-DQB2P05538 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQB2P05538 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQB2P05538 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQB2P05538 ALG3P1-201ENST00000508806 1114 ntBASIC15.08■□□□□ 0
HLA-DQB2P05538 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.08■□□□□ 0
HLA-DQB2P05538 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQB2P05538 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQB2P05538 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HLA-DQB2P05538 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HLA-DQB2P05538 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQB2P05538 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQB2P05538 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQB2P05538 C2orf69P2-201ENST00000562032 1123 ntBASIC15.08■□□□□ 0
HLA-DQB2P05538 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQB2P05538 BX088702.1-201ENST00000610784 235 ntBASIC15.08■□□□□ 0
HLA-DQB2P05538 MIR6775-201ENST00000617557 69 ntBASIC15.08■□□□□ 0
HLA-DQB2P05538 AP001002.3-201ENST00000623482 206 ntBASIC15.08■□□□□ 0
HLA-DQB2P05538 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DQB2P05538 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms