Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CD74P04233 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 AGAP10P-201ENST00000454844 2418 ntBASIC12.56□□□□□ -0.4
CD74P04233 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.56□□□□□ -0.4
CD74P04233 AC072061.1-201ENST00000569710 2234 ntBASIC12.56□□□□□ -0.4
CD74P04233 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 AL158070.2-201ENST00000623713 1621 ntBASIC12.55□□□□□ -0.4
CD74P04233 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 AL023775.1-201ENST00000454907 1746 ntBASIC12.55□□□□□ -0.4
CD74P04233 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.55□□□□□ -0.4
CD74P04233 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.55□□□□□ -0.4
CD74P04233 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.55□□□□□ -0.4
CD74P04233 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.55□□□□□ -0.4
CD74P04233 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.55□□□□□ -0.4
CD74P04233 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.55□□□□□ -0.4
CD74P04233 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 AC027601.4-201ENST00000611259 610 ntBASIC12.55□□□□□ -0.4
CD74P04233 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 FAM197Y3-203ENST00000618346 717 ntBASIC12.55□□□□□ -0.4
CD74P04233 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.55□□□□□ -0.4
CD74P04233 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 AC011498.7-201ENST00000624986 2027 ntBASIC12.55□□□□□ -0.4
CD74P04233 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CD74P04233 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
CD74P04233 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD74P04233 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.55□□□□□ -0.4
CD74P04233 ZNF259P1-201ENST00000407656 1365 ntBASIC12.55□□□□□ -0.4
CD74P04233 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD74P04233 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms