Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CTNSO60931 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.97□□□□□ -0.17
CTNSO60931 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.97□□□□□ -0.17
CTNSO60931 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 MIR4683-201ENST00000579659 81 ntBASIC13.97□□□□□ -0.17
CTNSO60931 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.97□□□□□ -0.17
CTNSO60931 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.97□□□□□ -0.17
CTNSO60931 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTNSO60931 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.97□□□□□ -0.17
CTNSO60931 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.97□□□□□ -0.17
CTNSO60931 AC092135.3-201ENST00000624151 1846 ntBASIC13.97□□□□□ -0.17
CTNSO60931 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CTNSO60931 AL136172.1-201ENST00000598590 1394 ntBASIC13.96□□□□□ -0.17
CTNSO60931 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CTNSO60931 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTNSO60931 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTNSO60931 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.96□□□□□ -0.17
CTNSO60931 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
CTNSO60931 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CTNSO60931 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CTNSO60931 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTNSO60931 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.96□□□□□ -0.17
CTNSO60931 BNIP3P42-201ENST00000454982 569 ntBASIC13.96□□□□□ -0.17
CTNSO60931 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.96□□□□□ -0.17
CTNSO60931 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
CTNSO60931 AP006547.1-201ENST00000563435 692 ntBASIC13.96□□□□□ -0.17
CTNSO60931 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.96□□□□□ -0.17
CTNSO60931 AC010328.2-201ENST00000597698 1111 ntBASIC13.96□□□□□ -0.17
CTNSO60931 BNIP3P29-201ENST00000598302 571 ntBASIC13.96□□□□□ -0.17
CTNSO60931 AC008825.2-201ENST00000603374 718 ntBASIC13.96□□□□□ -0.17
CTNSO60931 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.96□□□□□ -0.17
CTNSO60931 AC011447.5-201ENST00000616168 564 ntBASIC13.96□□□□□ -0.17
CTNSO60931 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTNSO60931 MTHFR-210ENST00000641407 2387 ntBASIC13.96□□□□□ -0.18
CTNSO60931 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.96□□□□□ -0.18
CTNSO60931 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CTNSO60931 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CTNSO60931 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.95□□□□□ -0.18
CTNSO60931 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.95□□□□□ -0.18
CTNSO60931 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.95□□□□□ -0.18
CTNSO60931 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.95□□□□□ -0.18
CTNSO60931 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.95□□□□□ -0.18
CTNSO60931 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.95□□□□□ -0.18
CTNSO60931 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CTNSO60931 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.95□□□□□ -0.18
CTNSO60931 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.95□□□□□ -0.18
CTNSO60931 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.95□□□□□ -0.18
CTNSO60931 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTNSO60931 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms