Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF11O60813 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF11O60813 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF11O60813 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF11O60813 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PRAMEF11O60813 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF11O60813 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
PRAMEF11O60813 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
PRAMEF11O60813 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.05■□□□□ 0
PRAMEF11O60813 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.05■□□□□ 0
PRAMEF11O60813 FLJ16779-201ENST00000612722 7638 ntBASIC15.05■□□□□ 0
PRAMEF11O60813 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PRAMEF11O60813 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
PRAMEF11O60813 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
PRAMEF11O60813 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PRAMEF11O60813 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
PRAMEF11O60813 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 INTS4P1-203ENST00000641008 3683 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 MTX1P1-201ENST00000440904 838 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 GOLGA2P4-201ENST00000441462 777 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 AL035414.1-201ENST00000451327 857 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.05■□□□□ -0
PRAMEF11O60813 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.05■□□□□ -0
PRAMEF11O60813 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.05■□□□□ -0
PRAMEF11O60813 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.05■□□□□ -0
PRAMEF11O60813 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.05■□□□□ -0
PRAMEF11O60813 DUX4L46-201ENST00000566845 751 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.05■□□□□ -0
PRAMEF11O60813 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.05■□□□□ -0
PRAMEF11O60813 AC027601.3-201ENST00000622907 509 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 AC099063.4-201ENST00000641099 1602 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.05■□□□□ -0
PRAMEF11O60813 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 KHSRPP1-201ENST00000427983 1768 ntBASIC15.05■□□□□ -0
PRAMEF11O60813 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PRAMEF11O60813 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.05■□□□□ -0
PRAMEF11O60813 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRAMEF11O60813 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRAMEF11O60813 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.04■□□□□ -0
PRAMEF11O60813 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PRAMEF11O60813 E2F3P2-201ENST00000447755 1422 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.04■□□□□ -0
PRAMEF11O60813 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 AL354877.1-201ENST00000424412 413 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 HSPB1P2-201ENST00000448722 546 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
PRAMEF11O60813 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.04■□□□□ -0
PRAMEF11O60813 MIR4783-201ENST00000580343 82 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 AC132192.2-201ENST00000596206 1147 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 AC009955.4-201ENST00000597192 544 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.04■□□□□ -0
PRAMEF11O60813 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.04■□□□□ -0
PRAMEF11O60813 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 AC006504.5-208ENST00000588784 2401 ntBASIC15.04■□□□□ -0
PRAMEF11O60813 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PRAMEF11O60813 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms