Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 AL136379.1-201ENST00000623471 2642 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 TMBIM7P-203ENST00000641617 1718 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.31■□□□□ 0.36
CTNND1O60716 AC026320.2-201ENST00000434379 478 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 RN7SL67P-201ENST00000492147 296 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 AC008723.1-201ENST00000506922 207 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.31■□□□□ 0.36
CTNND1O60716 RBM8B-201ENST00000555532 525 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CTNND1O60716 AC103810.10-201ENST00000606504 343 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 MIR6769A-201ENST00000617340 73 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 COX6A1P2-201ENST00000620597 330 ntBASIC17.31■□□□□ 0.36
CTNND1O60716 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CTNND1O60716 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.31■□□□□ 0.36
CTNND1O60716 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNND1O60716 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTNND1O60716 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.3■□□□□ 0.36
CTNND1O60716 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.3■□□□□ 0.36
CTNND1O60716 OR2K2-202ENST00000374428 1038 ntBASIC17.3■□□□□ 0.36
CTNND1O60716 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTNND1O60716 XBP1P1-201ENST00000436573 652 ntBASIC17.3■□□□□ 0.36
CTNND1O60716 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CTNND1O60716 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.3■□□□□ 0.36
CTNND1O60716 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.3■□□□□ 0.36
CTNND1O60716 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNND1O60716 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.3■□□□□ 0.36
CTNND1O60716 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.3■□□□□ 0.36
CTNND1O60716 MEG3_2.1-201ENST00000611456 105 ntBASIC17.3■□□□□ 0.36
CTNND1O60716 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 AC011491.1-203ENST00000637688 543 ntBASIC17.3■□□□□ 0.36
CTNND1O60716 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNND1O60716 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNND1O60716 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.3■□□□□ 0.36
CTNND1O60716 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNND1O60716 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 FRMPD2B-201ENST00000431305 1347 ntBASIC17.29■□□□□ 0.36
CTNND1O60716 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CTNND1O60716 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 RN7SL181P-201ENST00000462921 277 ntBASIC17.29■□□□□ 0.36
CTNND1O60716 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 MIR3188-201ENST00000583494 85 ntBASIC17.29■□□□□ 0.36
CTNND1O60716 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.29■□□□□ 0.36
CTNND1O60716 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 AL109837.1-201ENST00000603272 613 ntBASIC17.29■□□□□ 0.36
CTNND1O60716 AP003419.4-201ENST00000616071 517 ntBASIC17.29■□□□□ 0.36
CTNND1O60716 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 AL805961.1-201ENST00000642026 753 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms