Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
XRCC2O43543 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
XRCC2O43543 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
XRCC2O43543 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.02□□□□□ -0.32
XRCC2O43543 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.02□□□□□ -0.32
XRCC2O43543 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
XRCC2O43543 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
XRCC2O43543 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.02□□□□□ -0.32
XRCC2O43543 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
XRCC2O43543 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
XRCC2O43543 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
XRCC2O43543 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 TLE1P1-201ENST00000422965 589 ntBASIC13.02□□□□□ -0.33
XRCC2O43543 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.02□□□□□ -0.33
XRCC2O43543 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.02□□□□□ -0.33
XRCC2O43543 TP53TG3HP-202ENST00000569755 579 ntBASIC13.02□□□□□ -0.33
XRCC2O43543 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.02□□□□□ -0.33
XRCC2O43543 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.02□□□□□ -0.33
XRCC2O43543 CTBP2P3-201ENST00000585629 1255 ntBASIC13.02□□□□□ -0.33
XRCC2O43543 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.02□□□□□ -0.33
XRCC2O43543 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.02□□□□□ -0.33
XRCC2O43543 AL033527.5-201ENST00000641382 801 ntBASIC13.02□□□□□ -0.33
XRCC2O43543 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
XRCC2O43543 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
XRCC2O43543 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
XRCC2O43543 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
XRCC2O43543 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
XRCC2O43543 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
XRCC2O43543 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
XRCC2O43543 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
XRCC2O43543 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.01□□□□□ -0.33
XRCC2O43543 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.01□□□□□ -0.33
XRCC2O43543 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.01□□□□□ -0.33
XRCC2O43543 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
XRCC2O43543 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
XRCC2O43543 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
XRCC2O43543 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
XRCC2O43543 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms