Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12□□□□□ -0.49
UPK2O00526 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
UPK2O00526 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 DFFBP1-201ENST00000433250 979 ntBASIC11.99□□□□□ -0.49
UPK2O00526 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.99□□□□□ -0.49
UPK2O00526 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.99□□□□□ -0.49
UPK2O00526 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.99□□□□□ -0.49
UPK2O00526 RNA5SP421-201ENST00000516864 134 ntBASIC11.99□□□□□ -0.49
UPK2O00526 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.99□□□□□ -0.49
UPK2O00526 AC123567.1-201ENST00000548294 1261 ntBASIC11.99□□□□□ -0.49
UPK2O00526 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.99□□□□□ -0.49
UPK2O00526 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.99□□□□□ -0.49
UPK2O00526 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 AC133539.2-201ENST00000604757 467 ntBASIC11.99□□□□□ -0.49
UPK2O00526 AC009118.2-201ENST00000613275 655 ntBASIC11.99□□□□□ -0.49
UPK2O00526 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.99□□□□□ -0.49
UPK2O00526 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.99□□□□□ -0.49
UPK2O00526 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UPK2O00526 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UPK2O00526 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK2O00526 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
UPK2O00526 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK2O00526 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
UPK2O00526 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms