Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 LINC01971-201ENST00000617888 1048 ntBASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 ANOS2P-203ENST00000472227 1816 ntBASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH1Q9Y2L9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 AC073130.3-201ENST00000624389 2278 ntBASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
LRCH1Q9Y2L9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 AC110285.7-201ENST00000624417 1536 ntBASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.66■■□□□ 1.06
LRCH1Q9Y2L9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
LRCH1Q9Y2L9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRCH1Q9Y2L9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LRCH1Q9Y2L9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRCH1Q9Y2L9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 AC242852.2-201ENST00000615738 1807 ntBASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRCH1Q9Y2L9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRCH1Q9Y2L9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 HLA-V-202ENST00000446817 847 ntBASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 AC092068.2-201ENST00000590491 1708 ntBASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 AC092667.1-201ENST00000434301 2586 ntBASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LRCH1Q9Y2L9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRCH1Q9Y2L9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms