Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP50Q9UKX7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
NUP50Q9UKX7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP50Q9UKX7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NUP50Q9UKX7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP50Q9UKX7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NUP50Q9UKX7 AC009299.2-201ENST00000482477 511 ntBASIC19.75■□□□□ 0.75
NUP50Q9UKX7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP50Q9UKX7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP50Q9UKX7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 AC087393.1-201ENST00000582896 145 ntBASIC19.74■□□□□ 0.75
NUP50Q9UKX7 AC019171.1-201ENST00000601251 1056 ntBASIC19.74■□□□□ 0.75
NUP50Q9UKX7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP50Q9UKX7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NUP50Q9UKX7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 KRT18P10-201ENST00000388836 1287 ntBASIC19.72■□□□□ 0.75
NUP50Q9UKX7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP50Q9UKX7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 AC138932.3-201ENST00000567634 1902 ntBASIC19.71■□□□□ 0.75
NUP50Q9UKX7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 RPS2P7-201ENST00000447334 885 ntBASIC19.71■□□□□ 0.75
NUP50Q9UKX7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUP50Q9UKX7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP50Q9UKX7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.7■□□□□ 0.74
NUP50Q9UKX7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUP50Q9UKX7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUP50Q9UKX7 AL031848.2-201ENST00000607670 837 ntBASIC19.7■□□□□ 0.74
NUP50Q9UKX7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms