Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB16Q9NRJ7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB16Q9NRJ7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB16Q9NRJ7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB16Q9NRJ7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB16Q9NRJ7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB16Q9NRJ7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB16Q9NRJ7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 PKD1P6-201ENST00000343738 4769 ntBASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 AC090877.2-201ENST00000558441 1738 ntBASIC19.68■□□□□ 0.74
PCDHB16Q9NRJ7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB16Q9NRJ7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 ABCB10P4-201ENST00000566803 2184 ntBASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB16Q9NRJ7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 MIR6765-201ENST00000614092 87 ntBASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 SLC25A24-204ENST00000569674 2357 ntBASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB16Q9NRJ7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB16Q9NRJ7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB16Q9NRJ7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB16Q9NRJ7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB16Q9NRJ7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB16Q9NRJ7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 AC087393.1-201ENST00000582896 145 ntBASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PCDHB16Q9NRJ7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB16Q9NRJ7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB16Q9NRJ7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB16Q9NRJ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB16Q9NRJ7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB16Q9NRJ7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB16Q9NRJ7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB16Q9NRJ7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms