Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HINT3Q9NQE9 AC090877.2-201ENST00000558441 1738 ntBASIC20.64■□□□□ 0.89
HINT3Q9NQE9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 ANOS2P-203ENST00000472227 1816 ntBASIC20.63■□□□□ 0.89
HINT3Q9NQE9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 RPS2P7-201ENST00000447334 885 ntBASIC20.63■□□□□ 0.89
HINT3Q9NQE9 SPCS2P3-201ENST00000500401 656 ntBASIC20.63■□□□□ 0.89
HINT3Q9NQE9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 MIR6765-201ENST00000614092 87 ntBASIC20.63■□□□□ 0.89
HINT3Q9NQE9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HINT3Q9NQE9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HINT3Q9NQE9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HINT3Q9NQE9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.6■□□□□ 0.89
HINT3Q9NQE9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HINT3Q9NQE9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HINT3Q9NQE9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HINT3Q9NQE9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HINT3Q9NQE9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HINT3Q9NQE9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
HINT3Q9NQE9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.58■□□□□ 0.88
HINT3Q9NQE9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HINT3Q9NQE9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 AC092068.2-201ENST00000590491 1708 ntBASIC20.56■□□□□ 0.88
HINT3Q9NQE9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HINT3Q9NQE9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms