Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF556Q9HAH1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF556Q9HAH1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF556Q9HAH1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF556Q9HAH1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ZNF556Q9HAH1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF556Q9HAH1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF556Q9HAH1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ZNF556Q9HAH1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF556Q9HAH1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF556Q9HAH1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.08■□□□□ 0.97
ZNF556Q9HAH1 AC233723.2-201ENST00000623798 2106 ntBASIC21.08■□□□□ 0.96
ZNF556Q9HAH1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ZNF556Q9HAH1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 ANOS2P-203ENST00000472227 1816 ntBASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF556Q9HAH1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 AC007029.1-201ENST00000604183 313 ntBASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 AC022413.1-201ENST00000624602 984 ntBASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF556Q9HAH1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF556Q9HAH1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF556Q9HAH1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZNF556Q9HAH1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms