Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.01■□□□□ 0.63
SSX3Q99909 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SSX3Q99909 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 FOXO3B-201ENST00000395675 1928 ntBASIC19■□□□□ 0.63
SSX3Q99909 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SSX3Q99909 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 BX664725.1-201ENST00000438252 379 ntBASIC19■□□□□ 0.63
SSX3Q99909 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SSX3Q99909 Z92544.1-202ENST00000571933 1220 ntBASIC19■□□□□ 0.63
SSX3Q99909 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19■□□□□ 0.63
SSX3Q99909 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX3Q99909 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SSX3Q99909 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 AC068473.5-201ENST00000616428 2072 ntBASIC18.99■□□□□ 0.63
SSX3Q99909 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SSX3Q99909 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SSX3Q99909 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX3Q99909 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX3Q99909 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX3Q99909 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX3Q99909 GUSBP5-201ENST00000418136 578 ntBASIC18.98■□□□□ 0.63
SSX3Q99909 KRT125P-201ENST00000546827 989 ntBASIC18.98■□□□□ 0.63
SSX3Q99909 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX3Q99909 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSX3Q99909 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SSX3Q99909 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SSX3Q99909 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.97■□□□□ 0.63
SSX3Q99909 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSX3Q99909 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX3Q99909 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX3Q99909 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX3Q99909 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX3Q99909 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.96■□□□□ 0.63
SSX3Q99909 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.96■□□□□ 0.63
SSX3Q99909 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.96■□□□□ 0.63
SSX3Q99909 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX3Q99909 AL139125.2-201ENST00000623134 1869 ntBASIC18.96■□□□□ 0.63
SSX3Q99909 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX3Q99909 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SSX3Q99909 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.96■□□□□ 0.63
SSX3Q99909 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX3Q99909 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.95■□□□□ 0.62
SSX3Q99909 AC011551.1-201ENST00000614101 683 ntBASIC18.95■□□□□ 0.62
SSX3Q99909 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX3Q99909 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
SSX3Q99909 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSX3Q99909 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX3Q99909 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX3Q99909 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX3Q99909 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSX3Q99909 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SSX3Q99909 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
SSX3Q99909 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSX3Q99909 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.94■□□□□ 0.62
SSX3Q99909 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX3Q99909 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX3Q99909 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX3Q99909 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX3Q99909 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX3Q99909 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX3Q99909 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX3Q99909 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.93■□□□□ 0.62
SSX3Q99909 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSX3Q99909 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSX3Q99909 MIR4281-201ENST00000580852 62 ntBASIC18.93■□□□□ 0.62
SSX3Q99909 AC137630.3-201ENST00000607245 391 ntBASIC18.93■□□□□ 0.62
SSX3Q99909 MIR4787-201ENST00000607364 84 ntBASIC18.93■□□□□ 0.62
SSX3Q99909 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms