Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF25Q96BH1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF25Q96BH1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RNF25Q96BH1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF25Q96BH1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RNF25Q96BH1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF25Q96BH1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RNF25Q96BH1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RNF25Q96BH1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RNF25Q96BH1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF25Q96BH1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RNF25Q96BH1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RNF25Q96BH1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RNF25Q96BH1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RNF25Q96BH1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.93■■□□□ 1.42
RNF25Q96BH1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF25Q96BH1 PVT1_1.1-201ENST00000615125 194 ntBASIC23.93■■□□□ 1.42
RNF25Q96BH1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF25Q96BH1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF25Q96BH1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF25Q96BH1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF25Q96BH1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF25Q96BH1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF25Q96BH1 AC011551.1-201ENST00000614101 683 ntBASIC23.92■■□□□ 1.42
RNF25Q96BH1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF25Q96BH1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF25Q96BH1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF25Q96BH1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RNF25Q96BH1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF25Q96BH1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF25Q96BH1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RNF25Q96BH1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF25Q96BH1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF25Q96BH1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF25Q96BH1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF25Q96BH1 TSPY13P-201ENST00000338964 914 ntBASIC23.9■■□□□ 1.42
RNF25Q96BH1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF25Q96BH1 AC022616.5-201ENST00000518796 181 ntBASIC23.9■■□□□ 1.42
RNF25Q96BH1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 AC010980.1-201ENST00000587192 1142 ntBASIC23.9■■□□□ 1.42
RNF25Q96BH1 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF25Q96BH1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF25Q96BH1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF25Q96BH1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF25Q96BH1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
RNF25Q96BH1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF25Q96BH1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RNF25Q96BH1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.88■■□□□ 1.41
RNF25Q96BH1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF25Q96BH1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RNF25Q96BH1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.88■■□□□ 1.41
RNF25Q96BH1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF25Q96BH1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.87■■□□□ 1.41
RNF25Q96BH1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF25Q96BH1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF25Q96BH1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF25Q96BH1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF25Q96BH1 AL022069.1-201ENST00000568025 1636 ntBASIC23.87■■□□□ 1.41
RNF25Q96BH1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF25Q96BH1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF25Q96BH1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF25Q96BH1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF25Q96BH1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF25Q96BH1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF25Q96BH1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF25Q96BH1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF25Q96BH1 AC120024.1-201ENST00000562672 995 ntBASIC23.86■■□□□ 1.41
RNF25Q96BH1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF25Q96BH1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms