Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
SMARCC1Q92922 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SMARCC1Q92922 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SMARCC1Q92922 AC006455.2-201ENST00000429931 906 ntBASIC29.63■■■□□ 2.33
SMARCC1Q92922 AC034268.1-201ENST00000441047 882 ntBASIC29.63■■■□□ 2.33
SMARCC1Q92922 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SMARCC1Q92922 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SMARCC1Q92922 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.62■■■□□ 2.33
SMARCC1Q92922 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SMARCC1Q92922 MIR3181-201ENST00000578512 73 ntBASIC29.62■■■□□ 2.33
SMARCC1Q92922 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.62■■■□□ 2.33
SMARCC1Q92922 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
SMARCC1Q92922 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SMARCC1Q92922 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
SMARCC1Q92922 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.61■■■□□ 2.33
SMARCC1Q92922 AC009086.3-201ENST00000623486 1008 ntBASIC29.61■■■□□ 2.33
SMARCC1Q92922 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SMARCC1Q92922 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
SMARCC1Q92922 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
SMARCC1Q92922 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
SMARCC1Q92922 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.6■■■□□ 2.33
SMARCC1Q92922 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.6■■■□□ 2.33
SMARCC1Q92922 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.6■■■□□ 2.33
SMARCC1Q92922 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SMARCC1Q92922 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
SMARCC1Q92922 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SMARCC1Q92922 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SMARCC1Q92922 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SMARCC1Q92922 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.59■■■□□ 2.33
SMARCC1Q92922 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SMARCC1Q92922 RARRES2P11-201ENST00000635158 484 ntBASIC29.59■■■□□ 2.33
SMARCC1Q92922 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
SMARCC1Q92922 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.59■■■□□ 2.33
SMARCC1Q92922 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SMARCC1Q92922 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
SMARCC1Q92922 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.59■■■□□ 2.33
SMARCC1Q92922 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SMARCC1Q92922 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.58■■■□□ 2.33
SMARCC1Q92922 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.58■■■□□ 2.33
SMARCC1Q92922 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.58■■■□□ 2.33
SMARCC1Q92922 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.58■■■□□ 2.33
SMARCC1Q92922 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.58■■■□□ 2.33
SMARCC1Q92922 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SMARCC1Q92922 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SMARCC1Q92922 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.57■■■□□ 2.32
SMARCC1Q92922 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.57■■■□□ 2.32
SMARCC1Q92922 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.57■■■□□ 2.32
SMARCC1Q92922 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SMARCC1Q92922 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.56■■■□□ 2.32
SMARCC1Q92922 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
SMARCC1Q92922 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.56■■■□□ 2.32
SMARCC1Q92922 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.56■■■□□ 2.32
SMARCC1Q92922 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SMARCC1Q92922 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SMARCC1Q92922 AC090192.1-201ENST00000517740 490 ntBASIC29.56■■■□□ 2.32
SMARCC1Q92922 MIR6089-201ENST00000616698 64 ntBASIC29.56■■■□□ 2.32
SMARCC1Q92922 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
SMARCC1Q92922 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC1Q92922 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC1Q92922 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC1Q92922 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
SMARCC1Q92922 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.55■■■□□ 2.32
SMARCC1Q92922 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.54■■■□□ 2.32
SMARCC1Q92922 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SMARCC1Q92922 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SMARCC1Q92922 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SMARCC1Q92922 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.54■■■□□ 2.32
SMARCC1Q92922 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.54■■■□□ 2.32
SMARCC1Q92922 AC022517.1-201ENST00000592429 346 ntBASIC29.54■■■□□ 2.32
SMARCC1Q92922 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.54■■■□□ 2.32
SMARCC1Q92922 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.54■■■□□ 2.32
SMARCC1Q92922 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC1Q92922 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
SMARCC1Q92922 YBX1P1-201ENST00000445822 960 ntBASIC29.53■■■□□ 2.32
SMARCC1Q92922 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.53■■■□□ 2.32
SMARCC1Q92922 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC1Q92922 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.53■■■□□ 2.32
SMARCC1Q92922 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMARCC1Q92922 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SMARCC1Q92922 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.52■■■□□ 2.32
SMARCC1Q92922 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.52■■■□□ 2.32
SMARCC1Q92922 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.52■■■□□ 2.32
SMARCC1Q92922 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.52■■■□□ 2.32
SMARCC1Q92922 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.51■■■□□ 2.32
SMARCC1Q92922 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMARCC1Q92922 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMARCC1Q92922 IKBKGP1-201ENST00000612193 1073 ntBASIC29.51■■■□□ 2.31
SMARCC1Q92922 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMARCC1Q92922 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
SMARCC1Q92922 SLC6A10P-202ENST00000431994 2058 ntBASIC29.5■■■□□ 2.31
SMARCC1Q92922 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCC1Q92922 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.5■■■□□ 2.31
SMARCC1Q92922 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCC1Q92922 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms