Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 DUSP8P4-201ENST00000399538 1761 ntBASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SPTSSBQ8NFR3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SPTSSBQ8NFR3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SPTSSBQ8NFR3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 CROCCP1-201ENST00000426910 5675 ntBASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPTSSBQ8NFR3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPTSSBQ8NFR3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 AC010864.1-201ENST00000609407 1511 ntBASIC12.62□□□□□ -0.39
SPTSSBQ8NFR3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPTSSBQ8NFR3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPTSSBQ8NFR3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms