Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 DUX4L9-201ENST00000449051 1259 ntBASIC21.62■■□□□ 1.05
MSRB3Q8IXL7 AL161729.1-201ENST00000604104 1402 ntBASIC21.62■■□□□ 1.05
MSRB3Q8IXL7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSRB3Q8IXL7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
MSRB3Q8IXL7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 MIR6765-201ENST00000614092 87 ntBASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.59■■□□□ 1.05
MSRB3Q8IXL7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MSRB3Q8IXL7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSRB3Q8IXL7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
MSRB3Q8IXL7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.58■■□□□ 1.05
MSRB3Q8IXL7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MSRB3Q8IXL7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MSRB3Q8IXL7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.58■■□□□ 1.04
MSRB3Q8IXL7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 AL117328.2-201ENST00000624617 1940 ntBASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 LONRF2P2-201ENST00000439212 571 ntBASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSRB3Q8IXL7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSRB3Q8IXL7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.56■■□□□ 1.04
MSRB3Q8IXL7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSRB3Q8IXL7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSRB3Q8IXL7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 AC233723.2-201ENST00000623798 2106 ntBASIC21.55■■□□□ 1.04
MSRB3Q8IXL7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 C1orf229-201ENST00000623686 2258 ntBASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSRB3Q8IXL7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSRB3Q8IXL7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 AC131274.2-201ENST00000580697 1507 ntBASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 U85056.1-201ENST00000616429 682 ntBASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
MSRB3Q8IXL7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MSRB3Q8IXL7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
MSRB3Q8IXL7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.52■■□□□ 1.03
MSRB3Q8IXL7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.52■■□□□ 1.03
MSRB3Q8IXL7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MSRB3Q8IXL7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms