Protein–RNA interactions for Protein: Q86UT5

PDZD3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3Q86UT5 MIR6724-1-201ENST00000616420 92 ntBASIC22.61■■□□□ 1.21
PDZD3Q86UT5 MIR6724-2-201ENST00000616483 92 ntBASIC22.61■■□□□ 1.21
PDZD3Q86UT5 MIR6724-4-201ENST00000617390 92 ntBASIC22.61■■□□□ 1.21
PDZD3Q86UT5 MIR6724-3-201ENST00000622482 92 ntBASIC22.61■■□□□ 1.21
PDZD3Q86UT5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PDZD3Q86UT5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PDZD3Q86UT5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PDZD3Q86UT5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.59■■□□□ 1.21
PDZD3Q86UT5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDZD3Q86UT5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDZD3Q86UT5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.58■■□□□ 1.21
PDZD3Q86UT5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.58■■□□□ 1.21
PDZD3Q86UT5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDZD3Q86UT5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.58■■□□□ 1.21
PDZD3Q86UT5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDZD3Q86UT5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
PDZD3Q86UT5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDZD3Q86UT5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PDZD3Q86UT5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 AC131274.2-201ENST00000580697 1507 ntBASIC22.56■■□□□ 1.2
PDZD3Q86UT5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD3Q86UT5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZD3Q86UT5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD3Q86UT5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PDZD3Q86UT5 AL139125.2-201ENST00000623134 1869 ntBASIC22.55■■□□□ 1.2
PDZD3Q86UT5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZD3Q86UT5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PDZD3Q86UT5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.54■■□□□ 1.2
PDZD3Q86UT5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.54■■□□□ 1.2
PDZD3Q86UT5 AL022069.1-201ENST00000568025 1636 ntBASIC22.53■■□□□ 1.2
PDZD3Q86UT5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.53■■□□□ 1.2
PDZD3Q86UT5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD3Q86UT5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 SUDS3P1-201ENST00000505831 966 ntBASIC22.52■■□□□ 1.2
PDZD3Q86UT5 MTDHP2-201ENST00000601468 714 ntBASIC22.52■■□□□ 1.2
PDZD3Q86UT5 SNX5-217ENST00000606557 1087 ntBASIC22.52■■□□□ 1.2
PDZD3Q86UT5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.52■■□□□ 1.2
PDZD3Q86UT5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 AL161729.1-201ENST00000604104 1402 ntBASIC22.51■■□□□ 1.19
PDZD3Q86UT5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 AC004448.1-201ENST00000458332 883 ntBASIC22.51■■□□□ 1.19
PDZD3Q86UT5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 AL512631.2-201ENST00000604634 923 ntBASIC22.51■■□□□ 1.19
PDZD3Q86UT5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD3Q86UT5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PDZD3Q86UT5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PDZD3Q86UT5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD3Q86UT5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.5■■□□□ 1.19
PDZD3Q86UT5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms