Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF43Q68DV7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF43Q68DV7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
RNF43Q68DV7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF43Q68DV7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF43Q68DV7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF43Q68DV7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF43Q68DV7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF43Q68DV7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF43Q68DV7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF43Q68DV7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF43Q68DV7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF43Q68DV7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF43Q68DV7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
RNF43Q68DV7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF43Q68DV7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF43Q68DV7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF43Q68DV7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF43Q68DV7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RNF43Q68DV7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RNF43Q68DV7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF43Q68DV7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RNF43Q68DV7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF43Q68DV7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF43Q68DV7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF43Q68DV7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF43Q68DV7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF43Q68DV7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.9■■□□□ 1.42
RNF43Q68DV7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF43Q68DV7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RNF43Q68DV7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF43Q68DV7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF43Q68DV7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF43Q68DV7 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF43Q68DV7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.89■■□□□ 1.41
RNF43Q68DV7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF43Q68DV7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF43Q68DV7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF43Q68DV7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF43Q68DV7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF43Q68DV7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF43Q68DV7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF43Q68DV7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 AC131281.2-201ENST00000520478 145 ntBASIC23.88■■□□□ 1.41
RNF43Q68DV7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 SNX5-217ENST00000606557 1087 ntBASIC23.88■■□□□ 1.41
RNF43Q68DV7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF43Q68DV7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF43Q68DV7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF43Q68DV7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF43Q68DV7 LINC00543-201ENST00000567234 1845 ntBASIC23.87■■□□□ 1.41
RNF43Q68DV7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
RNF43Q68DV7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF43Q68DV7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF43Q68DV7 AL136116.3-201ENST00000402907 1138 ntBASIC23.87■■□□□ 1.41
RNF43Q68DV7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.87■■□□□ 1.41
RNF43Q68DV7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF43Q68DV7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.87■■□□□ 1.41
RNF43Q68DV7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF43Q68DV7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF43Q68DV7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF43Q68DV7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF43Q68DV7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RNF43Q68DV7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF43Q68DV7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF43Q68DV7 AC079834.2-201ENST00000609776 1949 ntBASIC23.86■■□□□ 1.41
RNF43Q68DV7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF43Q68DV7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF43Q68DV7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF43Q68DV7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF43Q68DV7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF43Q68DV7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF43Q68DV7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RNF43Q68DV7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF43Q68DV7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF43Q68DV7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF43Q68DV7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RNF43Q68DV7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF43Q68DV7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.83■■□□□ 1.41
RNF43Q68DV7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RNF43Q68DV7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF43Q68DV7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms