Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC129492.7-201ENST00000622992 756 ntBASIC25.19■■□□□ 1.62
CDKAL1Q5VV42 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDKAL1Q5VV42 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDKAL1Q5VV42 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDKAL1Q5VV42 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDKAL1Q5VV42 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDKAL1Q5VV42 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
CDKAL1Q5VV42 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CDKAL1Q5VV42 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.18■■□□□ 1.62
CDKAL1Q5VV42 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CDKAL1Q5VV42 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CDKAL1Q5VV42 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDKAL1Q5VV42 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CDKAL1Q5VV42 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.17■■□□□ 1.62
CDKAL1Q5VV42 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDKAL1Q5VV42 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDKAL1Q5VV42 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.17■■□□□ 1.62
CDKAL1Q5VV42 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDKAL1Q5VV42 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CDKAL1Q5VV42 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.16■■□□□ 1.62
CDKAL1Q5VV42 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDKAL1Q5VV42 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.16■■□□□ 1.62
CDKAL1Q5VV42 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDKAL1Q5VV42 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDKAL1Q5VV42 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CDKAL1Q5VV42 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CDKAL1Q5VV42 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 AC131274.2-201ENST00000580697 1507 ntBASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 KRT18P60-201ENST00000312876 1297 ntBASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 AC011551.1-201ENST00000614101 683 ntBASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDKAL1Q5VV42 AL022069.1-201ENST00000568025 1636 ntBASIC25.14■■□□□ 1.61
CDKAL1Q5VV42 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CDKAL1Q5VV42 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDKAL1Q5VV42 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDKAL1Q5VV42 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 HSD17B1P1-201ENST00000590052 955 ntBASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDKAL1Q5VV42 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDKAL1Q5VV42 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.09■■□□□ 1.61
CDKAL1Q5VV42 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDKAL1Q5VV42 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.09■■□□□ 1.61
CDKAL1Q5VV42 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDKAL1Q5VV42 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDKAL1Q5VV42 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDKAL1Q5VV42 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDKAL1Q5VV42 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
CDKAL1Q5VV42 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 AC019171.1-201ENST00000601251 1056 ntBASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDKAL1Q5VV42 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDKAL1Q5VV42 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.06■■□□□ 1.6
CDKAL1Q5VV42 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.06■■□□□ 1.6
CDKAL1Q5VV42 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDKAL1Q5VV42 ALDH1A3-203ENST00000557963 1670 ntBASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms