Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 AC022616.5-201ENST00000518796 181 ntBASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATPAF1Q5TC12 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 FOXO3B-201ENST00000395675 1928 ntBASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 AL592295.1-201ENST00000400984 884 ntBASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
ATPAF1Q5TC12 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF1Q5TC12 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 AC010980.1-201ENST00000587192 1142 ntBASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 PVT1_1.1-201ENST00000615125 194 ntBASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF1Q5TC12 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF1Q5TC12 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 AL117328.2-201ENST00000624617 1940 ntBASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF1Q5TC12 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF1Q5TC12 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 MIR4508-201ENST00000584178 70 ntBASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.66■□□□□ 0.74
ATPAF1Q5TC12 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms