Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.15■■□□□ 1.14
SGO1Q5FBB7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SGO1Q5FBB7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SGO1Q5FBB7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SGO1Q5FBB7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SGO1Q5FBB7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SGO1Q5FBB7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SGO1Q5FBB7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
SGO1Q5FBB7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 AC022616.5-201ENST00000518796 181 ntBASIC22.14■■□□□ 1.13
SGO1Q5FBB7 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SGO1Q5FBB7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 AC012354.3-201ENST00000623734 483 ntBASIC22.13■■□□□ 1.13
SGO1Q5FBB7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SGO1Q5FBB7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 AC120024.1-201ENST00000562672 995 ntBASIC22.12■■□□□ 1.13
SGO1Q5FBB7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SGO1Q5FBB7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 AL022069.1-201ENST00000568025 1636 ntBASIC22.11■■□□□ 1.13
SGO1Q5FBB7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SGO1Q5FBB7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.1■■□□□ 1.13
SGO1Q5FBB7 AC074183.2-201ENST00000623112 922 ntBASIC22.1■■□□□ 1.13
SGO1Q5FBB7 AC133561.1-201ENST00000568600 2415 ntBASIC22.1■■□□□ 1.13
SGO1Q5FBB7 DUSP8P5-201ENST00000422884 1815 ntBASIC22.1■■□□□ 1.13
SGO1Q5FBB7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SGO1Q5FBB7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SGO1Q5FBB7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SGO1Q5FBB7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SGO1Q5FBB7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SGO1Q5FBB7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SGO1Q5FBB7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.08■■□□□ 1.13
SGO1Q5FBB7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SGO1Q5FBB7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SGO1Q5FBB7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SGO1Q5FBB7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SGO1Q5FBB7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SGO1Q5FBB7 AC131274.2-201ENST00000580697 1507 ntBASIC22.06■■□□□ 1.12
SGO1Q5FBB7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.05■■□□□ 1.12
SGO1Q5FBB7 THA1P-201ENST00000590384 1145 ntBASIC22.05■■□□□ 1.12
SGO1Q5FBB7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms