Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIRPAP78324 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIRPAP78324 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.81■□□□□ 0.92
SIRPAP78324 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.81■□□□□ 0.92
SIRPAP78324 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIRPAP78324 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIRPAP78324 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIRPAP78324 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.81■□□□□ 0.92
SIRPAP78324 AC021242.3-201ENST00000607598 1377 ntBASIC20.81■□□□□ 0.92
SIRPAP78324 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.8■□□□□ 0.92
SIRPAP78324 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SIRPAP78324 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPAP78324 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.79■□□□□ 0.92
SIRPAP78324 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.79■□□□□ 0.92
SIRPAP78324 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.79■□□□□ 0.92
SIRPAP78324 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
SIRPAP78324 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.79■□□□□ 0.92
SIRPAP78324 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIRPAP78324 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
SIRPAP78324 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.79■□□□□ 0.92
SIRPAP78324 UNC93B8-201ENST00000511903 705 ntBASIC20.79■□□□□ 0.92
SIRPAP78324 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.79■□□□□ 0.92
SIRPAP78324 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIRPAP78324 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIRPAP78324 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SIRPAP78324 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
SIRPAP78324 KRT16P3-201ENST00000439127 1283 ntBASIC20.78■□□□□ 0.92
SIRPAP78324 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 AC090877.2-201ENST00000558441 1738 ntBASIC20.78■□□□□ 0.92
SIRPAP78324 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPAP78324 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.77■□□□□ 0.92
SIRPAP78324 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIRPAP78324 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SIRPAP78324 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIRPAP78324 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIRPAP78324 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIRPAP78324 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.76■□□□□ 0.91
SIRPAP78324 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
SIRPAP78324 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIRPAP78324 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.76■□□□□ 0.91
SIRPAP78324 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
SIRPAP78324 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIRPAP78324 AC004812.2-201ENST00000611079 2094 ntBASIC20.76■□□□□ 0.91
SIRPAP78324 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIRPAP78324 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SIRPAP78324 AC092028.1-203ENST00000608262 953 ntBASIC20.75■□□□□ 0.91
SIRPAP78324 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.75■□□□□ 0.91
SIRPAP78324 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.75■□□□□ 0.91
SIRPAP78324 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIRPAP78324 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIRPAP78324 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPAP78324 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPAP78324 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.74■□□□□ 0.91
SIRPAP78324 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPAP78324 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.74■□□□□ 0.91
SIRPAP78324 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPAP78324 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPAP78324 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.74■□□□□ 0.91
SIRPAP78324 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.74■□□□□ 0.91
SIRPAP78324 AC068473.5-201ENST00000616428 2072 ntBASIC20.74■□□□□ 0.91
SIRPAP78324 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.74■□□□□ 0.91
SIRPAP78324 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPAP78324 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPAP78324 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.73■□□□□ 0.91
SIRPAP78324 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
SIRPAP78324 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.73■□□□□ 0.91
SIRPAP78324 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPAP78324 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.73■□□□□ 0.91
SIRPAP78324 MIR6089-201ENST00000616698 64 ntBASIC20.73■□□□□ 0.91
SIRPAP78324 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPAP78324 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.73■□□□□ 0.91
SIRPAP78324 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPAP78324 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.73■□□□□ 0.91
SIRPAP78324 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SIRPAP78324 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPAP78324 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.72■□□□□ 0.91
SIRPAP78324 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPAP78324 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPAP78324 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPAP78324 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.72■□□□□ 0.91
SIRPAP78324 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SIRPAP78324 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPAP78324 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.72■□□□□ 0.91
SIRPAP78324 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPAP78324 AF131216.4-201ENST00000638924 1588 ntBASIC20.72■□□□□ 0.91
SIRPAP78324 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPAP78324 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.71■□□□□ 0.91
SIRPAP78324 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms