Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA52P62987 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 AC019171.1-201ENST00000601251 1056 ntBASIC19.54■□□□□ 0.72
UBA52P62987 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UBA52P62987 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UBA52P62987 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA52P62987 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBA52P62987 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.53■□□□□ 0.72
UBA52P62987 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 AL356441.2-201ENST00000443009 864 ntBASIC19.53■□□□□ 0.72
UBA52P62987 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA52P62987 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA52P62987 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA52P62987 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBA52P62987 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA52P62987 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA52P62987 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBA52P62987 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.52■□□□□ 0.72
UBA52P62987 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA52P62987 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA52P62987 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA52P62987 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA52P62987 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA52P62987 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.51■□□□□ 0.71
UBA52P62987 AC087393.1-201ENST00000582896 145 ntBASIC19.51■□□□□ 0.71
UBA52P62987 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.51■□□□□ 0.71
UBA52P62987 LINC00565-201ENST00000562710 2331 ntBASIC19.51■□□□□ 0.71
UBA52P62987 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA52P62987 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.5■□□□□ 0.71
UBA52P62987 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBA52P62987 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.5■□□□□ 0.71
UBA52P62987 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA52P62987 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBA52P62987 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBA52P62987 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBA52P62987 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBA52P62987 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBA52P62987 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.49■□□□□ 0.71
UBA52P62987 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.49■□□□□ 0.71
UBA52P62987 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.49■□□□□ 0.71
UBA52P62987 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.49■□□□□ 0.71
UBA52P62987 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBA52P62987 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBA52P62987 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.49■□□□□ 0.71
UBA52P62987 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.49■□□□□ 0.71
UBA52P62987 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UBA52P62987 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
UBA52P62987 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
UBA52P62987 AC239859.2-201ENST00000444165 318 ntBASIC19.48■□□□□ 0.71
UBA52P62987 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
UBA52P62987 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 C9orf163-202ENST00000624034 2573 ntBASIC19.48■□□□□ 0.71
UBA52P62987 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 PKD1P6-201ENST00000343738 4769 ntBASIC19.48■□□□□ 0.71
UBA52P62987 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
UBA52P62987 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBA52P62987 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
UBA52P62987 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.47■□□□□ 0.71
UBA52P62987 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.47■□□□□ 0.71
UBA52P62987 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.47■□□□□ 0.71
UBA52P62987 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.47■□□□□ 0.71
UBA52P62987 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
UBA52P62987 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
UBA52P62987 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBA52P62987 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA52P62987 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA52P62987 RPS2P7-201ENST00000447334 885 ntBASIC19.46■□□□□ 0.71
UBA52P62987 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms