Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.02■□□□□ 0.96
PER3P56645 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PER3P56645 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PER3P56645 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.02■□□□□ 0.96
PER3P56645 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
PER3P56645 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PER3P56645 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.02■□□□□ 0.95
PER3P56645 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PER3P56645 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PER3P56645 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PER3P56645 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PER3P56645 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
PER3P56645 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PER3P56645 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PER3P56645 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.01■□□□□ 0.95
PER3P56645 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PER3P56645 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PER3P56645 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PER3P56645 CLDN5-201ENST00000403084 2357 ntBASIC21■□□□□ 0.95
PER3P56645 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21■□□□□ 0.95
PER3P56645 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PER3P56645 FOXO3B-201ENST00000395675 1928 ntBASIC21■□□□□ 0.95
PER3P56645 ERN1-208ENST00000606895 2068 ntBASIC21■□□□□ 0.95
PER3P56645 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21■□□□□ 0.95
PER3P56645 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PER3P56645 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PER3P56645 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.99■□□□□ 0.95
PER3P56645 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.99■□□□□ 0.95
PER3P56645 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PER3P56645 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PER3P56645 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PER3P56645 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.98■□□□□ 0.95
PER3P56645 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.98■□□□□ 0.95
PER3P56645 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PER3P56645 AC079834.2-201ENST00000609776 1949 ntBASIC20.98■□□□□ 0.95
PER3P56645 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PER3P56645 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.97■□□□□ 0.95
PER3P56645 AL136162.1-201ENST00000607711 1078 ntBASIC20.97■□□□□ 0.95
PER3P56645 AC135279.3-201ENST00000610945 1311 ntBASIC20.97■□□□□ 0.95
PER3P56645 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PER3P56645 AC097639.1-201ENST00000565519 1891 ntBASIC20.96■□□□□ 0.95
PER3P56645 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PER3P56645 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PER3P56645 UNC93B3-201ENST00000308076 687 ntBASIC20.96■□□□□ 0.95
PER3P56645 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PER3P56645 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.96■□□□□ 0.95
PER3P56645 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PER3P56645 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
PER3P56645 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PER3P56645 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PER3P56645 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PER3P56645 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PER3P56645 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PER3P56645 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.95■□□□□ 0.94
PER3P56645 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.95■□□□□ 0.94
PER3P56645 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PER3P56645 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.95■□□□□ 0.94
PER3P56645 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PER3P56645 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PER3P56645 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PER3P56645 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PER3P56645 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
PER3P56645 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.94■□□□□ 0.94
PER3P56645 EDA-201ENST00000338901 1233 ntBASIC20.94■□□□□ 0.94
PER3P56645 AC026271.2-201ENST00000428091 497 ntBASIC20.94■□□□□ 0.94
PER3P56645 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PER3P56645 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.94■□□□□ 0.94
PER3P56645 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PER3P56645 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PER3P56645 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PER3P56645 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PER3P56645 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PER3P56645 SRD5A1P1-201ENST00000442297 786 ntBASIC20.93■□□□□ 0.94
PER3P56645 AC010501.1-201ENST00000606270 1962 ntBASIC20.93■□□□□ 0.94
PER3P56645 AC096887.2-201ENST00000623443 1957 ntBASIC20.93■□□□□ 0.94
PER3P56645 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PER3P56645 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PER3P56645 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PER3P56645 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PER3P56645 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.92■□□□□ 0.94
PER3P56645 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PER3P56645 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PER3P56645 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.92■□□□□ 0.94
PER3P56645 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.92■□□□□ 0.94
PER3P56645 AL355001.2-201ENST00000620617 1191 ntBASIC20.92■□□□□ 0.94
PER3P56645 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.92■□□□□ 0.94
PER3P56645 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.92■□□□□ 0.94
PER3P56645 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms