Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.56■□□□□ 0.56
SAA4P35542 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA4P35542 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.56■□□□□ 0.56
SAA4P35542 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SAA4P35542 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SAA4P35542 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.56■□□□□ 0.56
SAA4P35542 AL136116.3-201ENST00000402907 1138 ntBASIC18.56■□□□□ 0.56
SAA4P35542 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SAA4P35542 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA4P35542 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.56■□□□□ 0.56
SAA4P35542 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA4P35542 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SAA4P35542 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.55■□□□□ 0.56
SAA4P35542 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SAA4P35542 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SAA4P35542 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.55■□□□□ 0.56
SAA4P35542 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.55■□□□□ 0.56
SAA4P35542 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.55■□□□□ 0.56
SAA4P35542 AL512631.2-201ENST00000604634 923 ntBASIC18.55■□□□□ 0.56
SAA4P35542 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SAA4P35542 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.55■□□□□ 0.56
SAA4P35542 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.55■□□□□ 0.56
SAA4P35542 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SAA4P35542 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SAA4P35542 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SAA4P35542 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SAA4P35542 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SAA4P35542 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SAA4P35542 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.54■□□□□ 0.56
SAA4P35542 MIR4466-201ENST00000606121 54 ntBASIC18.54■□□□□ 0.56
SAA4P35542 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.54■□□□□ 0.56
SAA4P35542 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SAA4P35542 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SAA4P35542 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.54■□□□□ 0.56
SAA4P35542 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.53■□□□□ 0.56
SAA4P35542 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA4P35542 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA4P35542 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SAA4P35542 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.52■□□□□ 0.56
SAA4P35542 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SAA4P35542 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SAA4P35542 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.52■□□□□ 0.55
SAA4P35542 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SAA4P35542 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.52■□□□□ 0.55
SAA4P35542 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SAA4P35542 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.51■□□□□ 0.55
SAA4P35542 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA4P35542 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA4P35542 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA4P35542 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.51■□□□□ 0.55
SAA4P35542 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SAA4P35542 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA4P35542 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SAA4P35542 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.51■□□□□ 0.55
SAA4P35542 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SAA4P35542 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA4P35542 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
SAA4P35542 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SAA4P35542 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SAA4P35542 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SAA4P35542 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA4P35542 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SAA4P35542 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.49■□□□□ 0.55
SAA4P35542 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SAA4P35542 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA4P35542 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.49■□□□□ 0.55
SAA4P35542 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA4P35542 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA4P35542 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA4P35542 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SAA4P35542 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.48■□□□□ 0.55
SAA4P35542 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.48■□□□□ 0.55
SAA4P35542 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA4P35542 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA4P35542 ALDH1A3-203ENST00000557963 1670 ntBASIC18.47■□□□□ 0.55
SAA4P35542 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA4P35542 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.47■□□□□ 0.55
SAA4P35542 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SAA4P35542 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SAA4P35542 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.47■□□□□ 0.55
SAA4P35542 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA4P35542 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SAA4P35542 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA4P35542 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA4P35542 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms