Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
CLCN1P35523 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CLCN1P35523 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 AC073130.3-201ENST00000624389 2278 ntBASIC25.94■■□□□ 1.74
CLCN1P35523 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CLCN1P35523 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.94■■□□□ 1.74
CLCN1P35523 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.94■■□□□ 1.74
CLCN1P35523 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CLCN1P35523 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN1P35523 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.93■■□□□ 1.74
CLCN1P35523 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.93■■□□□ 1.74
CLCN1P35523 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.93■■□□□ 1.74
CLCN1P35523 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.93■■□□□ 1.74
CLCN1P35523 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLCN1P35523 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLCN1P35523 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
CLCN1P35523 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.92■■□□□ 1.74
CLCN1P35523 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.92■■□□□ 1.74
CLCN1P35523 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 AC092667.1-201ENST00000434301 2586 ntBASIC25.92■■□□□ 1.74
CLCN1P35523 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CLCN1P35523 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 SLC6A10P-202ENST00000431994 2058 ntBASIC25.92■■□□□ 1.74
CLCN1P35523 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN1P35523 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.91■■□□□ 1.74
CLCN1P35523 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLCN1P35523 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCN1P35523 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCN1P35523 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CLCN1P35523 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
CLCN1P35523 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCN1P35523 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CLCN1P35523 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.91■■□□□ 1.74
CLCN1P35523 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLCN1P35523 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN1P35523 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.9■■□□□ 1.74
CLCN1P35523 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.9■■□□□ 1.74
CLCN1P35523 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CLCN1P35523 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CLCN1P35523 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN1P35523 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN1P35523 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN1P35523 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.89■■□□□ 1.74
CLCN1P35523 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.89■■□□□ 1.74
CLCN1P35523 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.89■■□□□ 1.74
CLCN1P35523 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.89■■□□□ 1.74
CLCN1P35523 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.89■■□□□ 1.73
CLCN1P35523 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.73
CLCN1P35523 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
CLCN1P35523 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CLCN1P35523 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCN1P35523 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.88■■□□□ 1.73
CLCN1P35523 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.88■■□□□ 1.73
CLCN1P35523 SMPD5-203ENST00000639008 1464 ntBASIC25.88■■□□□ 1.73
CLCN1P35523 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLCN1P35523 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN1P35523 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN1P35523 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CLCN1P35523 ECEL1P2-201ENST00000461596 1295 ntBASIC25.87■■□□□ 1.73
CLCN1P35523 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.87■■□□□ 1.73
CLCN1P35523 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN1P35523 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN1P35523 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN1P35523 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
CLCN1P35523 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
CLCN1P35523 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CLCN1P35523 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CLCN1P35523 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CLCN1P35523 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLCN1P35523 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.85■■□□□ 1.73
CLCN1P35523 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLCN1P35523 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLCN1P35523 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
CLCN1P35523 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 GPX1-201ENST00000419349 1106 ntBASIC25.84■■□□□ 1.73
CLCN1P35523 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CLCN1P35523 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.84■■□□□ 1.73
CLCN1P35523 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms