Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GDF1P27539 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GDF1P27539 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
GDF1P27539 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDF1P27539 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.8■□□□□ 0.92
GDF1P27539 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDF1P27539 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF1P27539 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.8■□□□□ 0.92
GDF1P27539 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
GDF1P27539 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF1P27539 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF1P27539 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDF1P27539 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF1P27539 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.79■□□□□ 0.92
GDF1P27539 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.79■□□□□ 0.92
GDF1P27539 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDF1P27539 AL161729.1-201ENST00000604104 1402 ntBASIC20.78■□□□□ 0.92
GDF1P27539 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.78■□□□□ 0.92
GDF1P27539 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF1P27539 AC135731.1-201ENST00000569415 2548 ntBASIC20.78■□□□□ 0.92
GDF1P27539 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.78■□□□□ 0.92
GDF1P27539 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GDF1P27539 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.78■□□□□ 0.92
GDF1P27539 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
GDF1P27539 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF1P27539 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF1P27539 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF1P27539 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.77■□□□□ 0.92
GDF1P27539 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
GDF1P27539 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF1P27539 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF1P27539 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.77■□□□□ 0.92
GDF1P27539 MIR4466-201ENST00000606121 54 ntBASIC20.77■□□□□ 0.92
GDF1P27539 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF1P27539 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.77■□□□□ 0.92
GDF1P27539 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDF1P27539 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF1P27539 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF1P27539 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF1P27539 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.76■□□□□ 0.91
GDF1P27539 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GDF1P27539 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.76■□□□□ 0.91
GDF1P27539 AL512631.2-201ENST00000604634 923 ntBASIC20.76■□□□□ 0.91
GDF1P27539 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF1P27539 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF1P27539 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF1P27539 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GDF1P27539 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.75■□□□□ 0.91
GDF1P27539 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF1P27539 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF1P27539 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF1P27539 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF1P27539 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF1P27539 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF1P27539 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GDF1P27539 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF1P27539 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GDF1P27539 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GDF1P27539 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.73■□□□□ 0.91
GDF1P27539 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF1P27539 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF1P27539 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.73■□□□□ 0.91
GDF1P27539 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDF1P27539 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF1P27539 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF1P27539 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF1P27539 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF1P27539 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.72■□□□□ 0.91
GDF1P27539 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
GDF1P27539 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF1P27539 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF1P27539 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF1P27539 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF1P27539 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF1P27539 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
GDF1P27539 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GDF1P27539 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
GDF1P27539 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GDF1P27539 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GDF1P27539 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GDF1P27539 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GDF1P27539 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GDF1P27539 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF1P27539 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF1P27539 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDF1P27539 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDF1P27539 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF1P27539 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.7■□□□□ 0.9
GDF1P27539 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDF1P27539 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms