Protein–RNA interactions for Protein: P25024

CXCR1, C-X-C chemokine receptor type 1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR1P25024 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR1P25024 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CXCR1P25024 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR1P25024 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.8■□□□□ 0.92
CXCR1P25024 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.79■□□□□ 0.92
CXCR1P25024 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.79■□□□□ 0.92
CXCR1P25024 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR1P25024 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.79■□□□□ 0.92
CXCR1P25024 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.79■□□□□ 0.92
CXCR1P25024 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.79■□□□□ 0.92
CXCR1P25024 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR1P25024 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR1P25024 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CXCR1P25024 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR1P25024 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXCR1P25024 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.77■□□□□ 0.92
CXCR1P25024 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CXCR1P25024 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CXCR1P25024 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CXCR1P25024 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR1P25024 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
CXCR1P25024 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.75■□□□□ 0.91
CXCR1P25024 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 AC137630.3-201ENST00000607245 391 ntBASIC20.75■□□□□ 0.91
CXCR1P25024 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.75■□□□□ 0.91
CXCR1P25024 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.75■□□□□ 0.91
CXCR1P25024 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR1P25024 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.74■□□□□ 0.91
CXCR1P25024 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.74■□□□□ 0.91
CXCR1P25024 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.74■□□□□ 0.91
CXCR1P25024 RARRES2P1-201ENST00000474487 481 ntBASIC20.74■□□□□ 0.91
CXCR1P25024 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CXCR1P25024 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.74■□□□□ 0.91
CXCR1P25024 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CXCR1P25024 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
CXCR1P25024 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
CXCR1P25024 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR1P25024 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
CXCR1P25024 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.73■□□□□ 0.91
CXCR1P25024 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR1P25024 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR1P25024 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR1P25024 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.73■□□□□ 0.91
CXCR1P25024 BX664725.1-201ENST00000438252 379 ntBASIC20.73■□□□□ 0.91
CXCR1P25024 AC004448.1-201ENST00000458332 883 ntBASIC20.73■□□□□ 0.91
CXCR1P25024 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.73■□□□□ 0.91
CXCR1P25024 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR1P25024 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR1P25024 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR1P25024 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.72■□□□□ 0.91
CXCR1P25024 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.72■□□□□ 0.91
CXCR1P25024 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CXCR1P25024 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 ALDH1A3-203ENST00000557963 1670 ntBASIC20.72■□□□□ 0.91
CXCR1P25024 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.72■□□□□ 0.91
CXCR1P25024 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR1P25024 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR1P25024 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCR1P25024 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CXCR1P25024 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CXCR1P25024 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms