Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 PVT1_1.1-201ENST00000615125 194 ntBASIC24.47■■□□□ 1.51
TNFAIP3P21580 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFAIP3P21580 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFAIP3P21580 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFAIP3P21580 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFAIP3P21580 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFAIP3P21580 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TNFAIP3P21580 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
TNFAIP3P21580 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.46■■□□□ 1.51
TNFAIP3P21580 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TNFAIP3P21580 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.46■■□□□ 1.51
TNFAIP3P21580 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.46■■□□□ 1.51
TNFAIP3P21580 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TNFAIP3P21580 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TNFAIP3P21580 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.46■■□□□ 1.51
TNFAIP3P21580 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.45■■□□□ 1.51
TNFAIP3P21580 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
TNFAIP3P21580 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.45■■□□□ 1.5
TNFAIP3P21580 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
TNFAIP3P21580 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFAIP3P21580 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.45■■□□□ 1.5
TNFAIP3P21580 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TNFAIP3P21580 AC120024.1-201ENST00000562672 995 ntBASIC24.45■■□□□ 1.5
TNFAIP3P21580 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TNFAIP3P21580 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFAIP3P21580 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TNFAIP3P21580 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.44■■□□□ 1.5
TNFAIP3P21580 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFAIP3P21580 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TNFAIP3P21580 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TNFAIP3P21580 AC010980.1-201ENST00000587192 1142 ntBASIC24.44■■□□□ 1.5
TNFAIP3P21580 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFAIP3P21580 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.44■■□□□ 1.5
TNFAIP3P21580 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.44■■□□□ 1.5
TNFAIP3P21580 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFAIP3P21580 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.44■■□□□ 1.5
TNFAIP3P21580 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFAIP3P21580 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNFAIP3P21580 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.43■■□□□ 1.5
TNFAIP3P21580 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TNFAIP3P21580 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TNFAIP3P21580 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TNFAIP3P21580 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
TNFAIP3P21580 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TNFAIP3P21580 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TNFAIP3P21580 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFAIP3P21580 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFAIP3P21580 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.42■■□□□ 1.5
TNFAIP3P21580 AC131274.2-201ENST00000580697 1507 ntBASIC24.42■■□□□ 1.5
TNFAIP3P21580 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFAIP3P21580 AC133561.1-201ENST00000568600 2415 ntBASIC24.42■■□□□ 1.5
TNFAIP3P21580 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TNFAIP3P21580 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFAIP3P21580 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.41■■□□□ 1.5
TNFAIP3P21580 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TNFAIP3P21580 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TNFAIP3P21580 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.41■■□□□ 1.5
TNFAIP3P21580 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TNFAIP3P21580 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TNFAIP3P21580 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.4■■□□□ 1.5
TNFAIP3P21580 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.4■■□□□ 1.5
TNFAIP3P21580 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.4■■□□□ 1.5
TNFAIP3P21580 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TNFAIP3P21580 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.4■■□□□ 1.5
TNFAIP3P21580 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TNFAIP3P21580 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TNFAIP3P21580 AC068473.5-201ENST00000616428 2072 ntBASIC24.39■■□□□ 1.5
TNFAIP3P21580 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
TNFAIP3P21580 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
TNFAIP3P21580 KRT18P24-201ENST00000344739 1156 ntBASIC24.39■■□□□ 1.49
TNFAIP3P21580 AC012354.3-201ENST00000623734 483 ntBASIC24.39■■□□□ 1.49
TNFAIP3P21580 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
TNFAIP3P21580 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TNFAIP3P21580 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.38■■□□□ 1.49
TNFAIP3P21580 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.38■■□□□ 1.49
TNFAIP3P21580 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.38■■□□□ 1.49
TNFAIP3P21580 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFAIP3P21580 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TNFAIP3P21580 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFAIP3P21580 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TNFAIP3P21580 THA1P-201ENST00000590384 1145 ntBASIC24.37■■□□□ 1.49
TNFAIP3P21580 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.37■■□□□ 1.49
TNFAIP3P21580 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TNFAIP3P21580 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms