Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 KRT125P-201ENST00000546827 989 ntBASIC20.7■□□□□ 0.9
CD53P19397 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CD53P19397 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD53P19397 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD53P19397 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.7■□□□□ 0.9
CD53P19397 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD53P19397 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD53P19397 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
CD53P19397 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CD53P19397 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CD53P19397 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CD53P19397 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD53P19397 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
CD53P19397 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.68■□□□□ 0.9
CD53P19397 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.68■□□□□ 0.9
CD53P19397 MIR4787-201ENST00000607364 84 ntBASIC20.68■□□□□ 0.9
CD53P19397 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CD53P19397 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD53P19397 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD53P19397 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD53P19397 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD53P19397 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD53P19397 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CD53P19397 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD53P19397 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
CD53P19397 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD53P19397 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.66■□□□□ 0.9
CD53P19397 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CD53P19397 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.66■□□□□ 0.9
CD53P19397 BX664725.1-201ENST00000438252 379 ntBASIC20.66■□□□□ 0.9
CD53P19397 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.66■□□□□ 0.9
CD53P19397 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD53P19397 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.66■□□□□ 0.9
CD53P19397 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CD53P19397 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.66■□□□□ 0.9
CD53P19397 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD53P19397 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD53P19397 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD53P19397 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
CD53P19397 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD53P19397 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD53P19397 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD53P19397 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD53P19397 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CD53P19397 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.65■□□□□ 0.9
CD53P19397 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.65■□□□□ 0.9
CD53P19397 AC022616.5-201ENST00000518796 181 ntBASIC20.65■□□□□ 0.9
CD53P19397 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD53P19397 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD53P19397 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD53P19397 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD53P19397 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD53P19397 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CD53P19397 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD53P19397 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.64■□□□□ 0.89
CD53P19397 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CD53P19397 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD53P19397 ABCB10P4-201ENST00000566803 2184 ntBASIC20.63■□□□□ 0.89
CD53P19397 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD53P19397 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD53P19397 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.63■□□□□ 0.89
CD53P19397 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CD53P19397 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD53P19397 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
CD53P19397 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.63■□□□□ 0.89
CD53P19397 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD53P19397 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.63■□□□□ 0.89
CD53P19397 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD53P19397 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD53P19397 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD53P19397 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD53P19397 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD53P19397 UNC93B8-201ENST00000511903 705 ntBASIC20.62■□□□□ 0.89
CD53P19397 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CD53P19397 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD53P19397 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.62■□□□□ 0.89
CD53P19397 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD53P19397 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD53P19397 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD53P19397 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD53P19397 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD53P19397 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD53P19397 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.61■□□□□ 0.89
CD53P19397 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD53P19397 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CD53P19397 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms