Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.85■□□□□ 0.93
FREM3P0C091 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.85■□□□□ 0.93
FREM3P0C091 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FREM3P0C091 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FREM3P0C091 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.84■□□□□ 0.93
FREM3P0C091 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.84■□□□□ 0.93
FREM3P0C091 AL139125.2-201ENST00000623134 1869 ntBASIC20.84■□□□□ 0.93
FREM3P0C091 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
FREM3P0C091 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FREM3P0C091 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
FREM3P0C091 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
FREM3P0C091 LINC01124-201ENST00000409786 2117 ntBASIC20.83■□□□□ 0.93
FREM3P0C091 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
FREM3P0C091 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FREM3P0C091 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.83■□□□□ 0.93
FREM3P0C091 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FREM3P0C091 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.83■□□□□ 0.93
FREM3P0C091 AC008406.3-201ENST00000620001 1374 ntBASIC20.83■□□□□ 0.93
FREM3P0C091 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.83■□□□□ 0.92
FREM3P0C091 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
FREM3P0C091 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.83■□□□□ 0.92
FREM3P0C091 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.83■□□□□ 0.92
FREM3P0C091 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FREM3P0C091 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.83■□□□□ 0.92
FREM3P0C091 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FREM3P0C091 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM3P0C091 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.82■□□□□ 0.92
FREM3P0C091 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM3P0C091 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.82■□□□□ 0.92
FREM3P0C091 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
FREM3P0C091 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
FREM3P0C091 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM3P0C091 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM3P0C091 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM3P0C091 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FREM3P0C091 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.81■□□□□ 0.92
FREM3P0C091 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FREM3P0C091 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
FREM3P0C091 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FREM3P0C091 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
FREM3P0C091 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
FREM3P0C091 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.81■□□□□ 0.92
FREM3P0C091 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.81■□□□□ 0.92
FREM3P0C091 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
FREM3P0C091 AC110285.6-201ENST00000617652 491 ntBASIC20.81■□□□□ 0.92
FREM3P0C091 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FREM3P0C091 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.8■□□□□ 0.92
FREM3P0C091 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FREM3P0C091 LINC00543-201ENST00000567234 1845 ntBASIC20.8■□□□□ 0.92
FREM3P0C091 AC019069.1-201ENST00000610008 1333 ntBASIC20.8■□□□□ 0.92
FREM3P0C091 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM3P0C091 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM3P0C091 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.8■□□□□ 0.92
FREM3P0C091 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM3P0C091 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FREM3P0C091 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.8■□□□□ 0.92
FREM3P0C091 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.8■□□□□ 0.92
FREM3P0C091 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 AC004448.1-201ENST00000458332 883 ntBASIC20.79■□□□□ 0.92
FREM3P0C091 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.79■□□□□ 0.92
FREM3P0C091 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM3P0C091 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.78■□□□□ 0.92
FREM3P0C091 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM3P0C091 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.78■□□□□ 0.92
FREM3P0C091 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.78■□□□□ 0.92
FREM3P0C091 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM3P0C091 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.78■□□□□ 0.92
FREM3P0C091 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM3P0C091 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.78■□□□□ 0.92
FREM3P0C091 AC005703.6-201ENST00000623265 1329 ntBASIC20.78■□□□□ 0.92
FREM3P0C091 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM3P0C091 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.78■□□□□ 0.92
FREM3P0C091 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FREM3P0C091 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM3P0C091 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
FREM3P0C091 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.77■□□□□ 0.92
FREM3P0C091 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.77■□□□□ 0.92
FREM3P0C091 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM3P0C091 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.77■□□□□ 0.91
FREM3P0C091 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.76■□□□□ 0.91
FREM3P0C091 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 AL136116.3-201ENST00000402907 1138 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms