Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.93■□□□□ 0.78
LCATP04180 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.93■□□□□ 0.78
LCATP04180 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.93■□□□□ 0.78
LCATP04180 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LCATP04180 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCATP04180 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
LCATP04180 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.92■□□□□ 0.78
LCATP04180 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LCATP04180 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 AC103724.3-201ENST00000564481 992 ntBASIC19.92■□□□□ 0.78
LCATP04180 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LCATP04180 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LCATP04180 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCATP04180 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCATP04180 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.91■□□□□ 0.78
LCATP04180 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCATP04180 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.91■□□□□ 0.78
LCATP04180 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCATP04180 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LCATP04180 AC131274.2-201ENST00000580697 1507 ntBASIC19.91■□□□□ 0.78
LCATP04180 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCATP04180 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.9■□□□□ 0.78
LCATP04180 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCATP04180 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.9■□□□□ 0.78
LCATP04180 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LCATP04180 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LCATP04180 AF131216.4-201ENST00000638924 1588 ntBASIC19.9■□□□□ 0.78
LCATP04180 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCATP04180 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCATP04180 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LCATP04180 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCATP04180 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCATP04180 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCATP04180 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.89■□□□□ 0.77
LCATP04180 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LCATP04180 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCATP04180 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.89■□□□□ 0.77
LCATP04180 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LCATP04180 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.88■□□□□ 0.77
LCATP04180 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 AL031848.2-201ENST00000607670 837 ntBASIC19.88■□□□□ 0.77
LCATP04180 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.88■□□□□ 0.77
LCATP04180 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCATP04180 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCATP04180 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCATP04180 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCATP04180 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCATP04180 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.87■□□□□ 0.77
LCATP04180 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCATP04180 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCATP04180 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCATP04180 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LCATP04180 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LCATP04180 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LCATP04180 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
LCATP04180 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCATP04180 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCATP04180 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LCATP04180 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCATP04180 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCATP04180 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.85■□□□□ 0.77
LCATP04180 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.85■□□□□ 0.77
LCATP04180 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.85■□□□□ 0.77
LCATP04180 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.85■□□□□ 0.77
LCATP04180 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.85■□□□□ 0.77
LCATP04180 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LCATP04180 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LCATP04180 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LCATP04180 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
LCATP04180 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LCATP04180 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.84■□□□□ 0.77
LCATP04180 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LCATP04180 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LCATP04180 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.84■□□□□ 0.77
LCATP04180 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.84■□□□□ 0.77
LCATP04180 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.84■□□□□ 0.77
LCATP04180 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms